HL_4V9S_216

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGACGGAAAUCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|DA|G|2302
4V9S|1|DA|G|2303
4V9S|1|DA|G|2304
4V9S|1|DA|A|2305
4V9S|1|DA|C|2306
4V9S|1|DA|G|2307
4V9S|1|DA|G|2308
4V9S|1|DA|A|2309
4V9S|1|DA|A|2310
4V9S|1|DA|A|2311
4V9S|1|DA|U|2312
4V9S|1|DA|C|2313
4V9S|1|DA|C|2314

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain CX

Transfer RNA; tRNA

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DG

50S Ribosomal Protein L5