HL_4W2E_077

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2E_077 not in the Motif Atlas

Homologous match to HL_4LFB_007

Geometric discrepancy: 0.0749

The information below is about HL_4LFB_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

4W2E|1|a|U|296
4W2E|1|a|G|297
4W2E|1|a|A|298
4W2E|1|a|G|299
4W2E|1|a|A|300
4W2E|1|a|G|301

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain e

30S ribosomal protein S5

Chain q

30S ribosomal protein S17