HL_4W2E_101

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUACGGG

Length

8 nucleotides

Bulged bases

4W2E|1|a|A|1447, 4W2E|1|a|G|1456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2E_101 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.329

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4W2E|1|a|C|1444
4W2E|1|a|C|1445
4W2E|1|a|U|1446
4W2E|1|a|A|1447
4W2E|1|a|C|1452
4W2E|1|a|G|1456
4W2E|1|a|G|1457
4W2E|1|a|G|1458

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L19

Chain t

30S ribosomal protein S20