HL_4W2E_116

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

4W2E|1|A|U|1175, 4W2E|1|A|G|1176, 4W2E|1|A|A|1177

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2E_116 not in the Motif Atlas

Homologous match to HL_9DFE_029

Geometric discrepancy: 0.5051

The information below is about HL_9DFE_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2E|1|A|G|1171
4W2E|1|A|G|1173
4W2E|1|A|A|1174
4W2E|1|A|U|1175
4W2E|1|A|G|1176
4W2E|1|A|A|1177
4W2E|1|A|C|1178

Current chains

Chain A

23S Ribosomal RNA

Nearby chains