HL_4W2F_043
3D structure
- PDB id
- 4W2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CGGUAGCGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2F_043 not in the Motif Atlas
- Homologous match to HL_7RQB_002
- Geometric discrepancy: 0.1132
- The information below is about HL_7RQB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96598.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 15
Unit IDs
4W2F|1|BA|C|86
4W2F|1|BA|G|87
4W2F|1|BA|G|88
4W2F|1|BA|U|89
4W2F|1|BA|A|90
4W2F|1|BA|G|91
4W2F|1|BA|C|92
4W2F|1|BA|G|93
4W2F|1|BA|G|94
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B2
- 50S Ribosomal Protein L29
- Chain BX
- 50S Ribosomal Protein L23
- Chain BY
- 50S Ribosomal Protein L24
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