HL_4W2G_066

3D structure

PDB id

4W2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

4W2G|1|BA|C|935

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2G_066 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.3308

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

4W2G|1|BA|C|931
4W2G|1|BA|C|932
4W2G|1|BA|C|933
4W2G|1|BA|A|934
4W2G|1|BA|C|935
4W2G|1|BA|C|936
4W2G|1|BA|A|937
4W2G|1|BA|G|938

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain AM

30S Ribosomal Protein S13