3D structure

PDB id
4W2G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
Experimental method
X-RAY DIFFRACTION
Resolution
2.55 Å

Loop

Sequence
CAUGGACG
Length
8 nucleotides
Bulged bases
4W2G|1|BA|U|1501
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4W2G_076 not in the Motif Atlas
Homologous match to HL_7RQB_037
Geometric discrepancy: 0.0827
The information below is about HL_7RQB_037
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_32426.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
1

Unit IDs

4W2G|1|BA|C|1499
4W2G|1|BA|A|1500
4W2G|1|BA|U|1501
4W2G|1|BA|G|1502
4W2G|1|BA|G|1503
4W2G|1|BA|A|1504
4W2G|1|BA|C|1505
4W2G|1|BA|G|1506

Current chains

Chain BA
23S Ribosomal RNA

Nearby chains

Chain BR
50S Ribosomal Protein L17

Coloring options:


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