HL_4W2G_162
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4W2G|1|DA|G|329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2G_162 not in the Motif Atlas
- Homologous match to HL_7RQB_012
- Geometric discrepancy: 0.0699
- The information below is about HL_7RQB_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.9
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 19
Unit IDs
4W2G|1|DA|G|327
4W2G|1|DA|U|328
4W2G|1|DA|G|329
4W2G|1|DA|A|330
4W2G|1|DA|A|331
4W2G|1|DA|A|332
4W2G|1|DA|G|333
4W2G|1|DA|C|334
4W2G|1|DA|C|335
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DF
- 50S Ribosomal Protein L4
- Chain DY
- 50S Ribosomal Protein L24
Coloring options: