HL_4W2G_176

3D structure

PDB id

4W2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2G_176 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.527

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

4W2G|1|DA|C|884
4W2G|1|DA|C|885
4W2G|1|DA|C|886
4W2G|1|DA|A|887
4W2G|1|DA|C|888
4W2G|1|DA|C|889
4W2G|1|DA|A|890
4W2G|1|DA|G|892

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain CM

30S Ribosomal Protein S13