HL_4W2H_047
3D structure
- PDB id
- 4W2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4W2H|1|BA|G|353
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2H_047 not in the Motif Atlas
- Homologous match to HL_7RQB_012
- Geometric discrepancy: 0.0539
- The information below is about HL_7RQB_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.9
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 19
Unit IDs
4W2H|1|BA|G|351
4W2H|1|BA|U|352
4W2H|1|BA|G|353
4W2H|1|BA|A|354
4W2H|1|BA|A|355
4W2H|1|BA|A|356
4W2H|1|BA|G|357
4W2H|1|BA|C|358
4W2H|1|BA|C|359
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BF
- 50S Ribosomal Protein L4
- Chain BY
- 50S Ribosomal Protein L24
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