HL_4W2I_089
3D structure
- PDB id
- 4W2I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 4W2I|1|BA|U|1977
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2I_089 not in the Motif Atlas
- Homologous match to HL_7RQB_049
- Geometric discrepancy: 0.0611
- The information below is about HL_7RQB_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51824.1
- Basepair signature
- cWW-F-F-tSH-F-F
- Number of instances in this motif group
- 8
Unit IDs
4W2I|1|BA|G|1971
4W2I|1|BA|G|1972
4W2I|1|BA|U|1973
4W2I|1|BA|A|1974
4W2I|1|BA|A|1975
4W2I|1|BA|G|1976
4W2I|1|BA|U|1977
4W2I|1|BA|U|1978
4W2I|1|BA|C|1979
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AW
- Transfer RNA; tRNA
- Chain BO
- 50S Ribosomal Protein L14
Coloring options: