HL_4W2I_091

3D structure

PDB id

4W2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CCGCCUCCGGGUGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2I|1|BA|C|2161
4W2I|1|BA|C|2162
4W2I|1|BA|G|2163
4W2I|1|BA|C|2164
4W2I|1|BA|C|2165
4W2I|1|BA|U|2166
4W2I|1|BA|C|2167
4W2I|1|BA|C|2168
4W2I|1|BA|G|2169
4W2I|1|BA|G|2170
4W2I|1|BA|G|2171
4W2I|1|BA|U|2172
4W2I|1|BA|G|2173
4W2I|1|BA|G|2174

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain AK

30S Ribosomal Protein S11