HL_4W4G_097

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_097 not in the Motif Atlas

Homologous match to HL_7RQB_058

Geometric discrepancy: 0.0584

The information below is about HL_7RQB_058

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4W4G|1|RA|C|2374
4W4G|1|RA|G|2375
4W4G|1|RA|A|2376
4W4G|1|RA|A|2377
4W4G|1|RA|A|2378
4W4G|1|RA|G|2379

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RS

50S ribosomal protein L18