HL_4W4G_103

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_103 not in the Motif Atlas

Geometric match to HL_5B2T_003

Geometric discrepancy: 0.0765

The information below is about HL_5B2T_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4W4G|1|RA|C|2658
4W4G|1|RA|G|2659
4W4G|1|RA|A|2660
4W4G|1|RA|G|2661
4W4G|1|RA|A|2662
4W4G|1|RA|G|2663

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RH

50S ribosomal protein L6