HL_4W4G_146
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCAGCCUGGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4W4G|1|XW|C|16, 4W4G|1|XW|G|18, 4W4G|1|XW|G|19
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W4G_146 not in the Motif Atlas
- Homologous match to HL_5IB8_207
- Geometric discrepancy: 0.5142
- The information below is about HL_5IB8_207
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W4G|1|XW|G|12
4W4G|1|XW|C|13
4W4G|1|XW|A|14
4W4G|1|XW|G|15
4W4G|1|XW|C|16
4W4G|1|XW|C|17
4W4G|1|XW|U|17|||A
4W4G|1|XW|G|18
4W4G|1|XW|G|19
4W4G|1|XW|U|20
4W4G|1|XW|A|21
4W4G|1|XW|G|22
4W4G|1|XW|C|23
Current chains
- Chain XW
- tRNA fMet
Nearby chains
- Chain XK
- 30S ribosomal protein S11
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: