HL_4W4G_225

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCUUGG

Length

6 nucleotides

Bulged bases

4W4G|1|XA|U|189, 4W4G|1|XA|G|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W4G_225 not in the Motif Atlas

Homologous match to HL_4LFB_004

Geometric discrepancy: 0.107

The information below is about HL_4LFB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.5

Basepair signature

cWW-F-F

Number of instances in this motif group

26

Unit IDs

4W4G|1|XA|C|186|||F
4W4G|1|XA|C|187
4W4G|1|XA|U|188
4W4G|1|XA|U|189
4W4G|1|XA|G|190
4W4G|1|XA|G|191|||A

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17

Chain XT

30S ribosomal protein S20