HL_4W90_003
3D structure
- PDB id
- 4W90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.12 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
4W90|1|C|C|82
4W90|1|C|G|83
4W90|1|C|A|84
4W90|1|C|A|85
4W90|1|C|A|86
4W90|1|C|G|87
Current chains
- Chain C
- riboswitch a pseudo-dimeric RNA
Nearby chains
No other chains within 10ÅColoring options: