HL_4WCE_025

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

4WCE|1|X|U|872, 4WCE|1|X|G|875

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WCE_025 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.0736

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

4WCE|1|X|U|871
4WCE|1|X|U|872
4WCE|1|X|U|873
4WCE|1|X|A|874
4WCE|1|X|G|875
4WCE|1|X|G|876

Current chains

Chain X

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L15