HL_4WCE_046

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

4WCE|1|X|U|1982

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WCE_046 not in the Motif Atlas

Homologous match to HL_4WF9_046

Geometric discrepancy: 0.0756

The information below is about HL_4WF9_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

4WCE|1|X|G|1976
4WCE|1|X|G|1977
4WCE|1|X|U|1978
4WCE|1|X|A|1979
4WCE|1|X|A|1980
4WCE|1|X|G|1981
4WCE|1|X|U|1982
4WCE|1|X|U|1983
4WCE|1|X|C|1984

Current chains

Chain X

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L14