HL_4WCE_051

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

GGUUGAAAUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WCE_051 not in the Motif Atlas

Homologous match to HL_4WF9_051

Geometric discrepancy: 0.398

The information below is about HL_4WF9_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WCE|1|X|G|2330
4WCE|1|X|G|2331
4WCE|1|X|U|2332
4WCE|1|X|U|2333
4WCE|1|X|G|2334
4WCE|1|X|A|2336
4WCE|1|X|A|2337
4WCE|1|X|A|2338
4WCE|1|X|U|2339
4WCE|1|X|C|2340

Current chains

Chain X

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L5