HL_4WCE_065

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

GGUGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WCE_065 not in the Motif Atlas

Homologous match to HL_4WF9_065

Geometric discrepancy: 0.0953

The information below is about HL_4WF9_065

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4WCE|1|X|G|2876
4WCE|1|X|G|2877
4WCE|1|X|U|2878
4WCE|1|X|G|2879
4WCE|1|X|A|2880
4WCE|1|X|C|2881

Current chains

Chain X

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L19