3D structure

PDB id
4WF9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin
Experimental method
X-RAY DIFFRACTION
Resolution
3.43 Å

Loop

Sequence
CUGGAAAG
Length
8 nucleotides
Bulged bases
4WF9|1|X|A|354
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
T-loop with 2 stacked bulged bases
Broad Annotation
T-loop
Motif group
HL_58705.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
23

Unit IDs

4WF9|1|X|C|348
4WF9|1|X|U|349
4WF9|1|X|G|350
4WF9|1|X|G|351
4WF9|1|X|A|352
4WF9|1|X|A|353
4WF9|1|X|A|354
4WF9|1|X|G|355

Current chains

Chain X
23S ribosomal RNA

Nearby chains

Chain R
50S ribosomal protein L24

Coloring options:

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