HL_4WF9_021

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UGAAUAG

Length

7 nucleotides

Bulged bases

4WF9|1|X|U|690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

GNRA with one bulged base

Broad Annotation

GNRA

Motif group

HL_58029.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

26

Unit IDs

4WF9|1|X|U|686
4WF9|1|X|G|687
4WF9|1|X|A|688
4WF9|1|X|A|689
4WF9|1|X|U|690
4WF9|1|X|A|691
4WF9|1|X|G|692

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35