3D structure

PDB id
4WF9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin
Experimental method
X-RAY DIFFRACTION
Resolution
3.43 Å

Loop

Sequence
UGAUAAGG
Length
8 nucleotides
Bulged bases
4WF9|1|X|U|1002, 4WF9|1|X|G|1005
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

4WF9|1|X|U|999
4WF9|1|X|G|1000
4WF9|1|X|A|1001
4WF9|1|X|U|1002
4WF9|1|X|A|1003
4WF9|1|X|A|1004
4WF9|1|X|G|1005
4WF9|1|X|G|1006

Current chains

Chain X
23S ribosomal RNA

Nearby chains

Chain J
50S ribosomal protein L16
Chain Y
5S ribosomal RNA; 5S rRNA

Coloring options:

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