HL_4WF9_043

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UUUAUCAAAAA

Length

11 nucleotides

Bulged bases

4WF9|1|X|A|1807, 4WF9|1|X|U|1808, 4WF9|1|X|C|1809, 4WF9|1|X|A|1813

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87681.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WF9|1|X|U|1804
4WF9|1|X|U|1805
4WF9|1|X|U|1806
4WF9|1|X|A|1807
4WF9|1|X|U|1808
4WF9|1|X|C|1809
4WF9|1|X|A|1810
4WF9|1|X|A|1811
4WF9|1|X|A|1812
4WF9|1|X|A|1813
4WF9|1|X|A|1814

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain A

50S ribosomal protein L2