HL_4WFA_009

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

CAAGCUUGCUUG

Length

12 nucleotides

Bulged bases

4WFA|1|X|C|284, 4WFA|1|X|U|285, 4WFA|1|X|U|286, 4WFA|1|X|U|290

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_009 not in the Motif Atlas

Homologous match to HL_4WF9_068

Geometric discrepancy: 0.2799

The information below is about HL_4WF9_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76195.1

Basepair signature

cWW-cWW-F-F-F-F

Number of instances in this motif group

5

Unit IDs

4WFA|1|X|C|280
4WFA|1|X|A|281
4WFA|1|X|A|282
4WFA|1|X|G|283
4WFA|1|X|C|284
4WFA|1|X|U|285
4WFA|1|X|U|286
4WFA|1|X|G|287
4WFA|1|X|C|288
4WFA|1|X|U|289
4WFA|1|X|U|290
4WFA|1|X|G|291

Current chains

Chain X

23S rRNA

Nearby chains