HL_4WFA_026

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GGGGGUUACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_026 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2265

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4WFA|1|X|G|924
4WFA|1|X|G|925
4WFA|1|X|G|926
4WFA|1|X|G|937
4WFA|1|X|G|938
4WFA|1|X|U|939
4WFA|1|X|U|940
4WFA|1|X|A|941
4WFA|1|X|C|942
4WFA|1|X|C|943

Current chains

Chain X

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L25