3D structure

PDB id
4WFA (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid
Experimental method
X-RAY DIFFRACTION
Resolution
3.39 Å

Loop

Sequence
CGUAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4WFA_031 not in the Motif Atlas
Homologous match to HL_4WF9_031
Geometric discrepancy: 0.1073
The information below is about HL_4WF9_031
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_34789.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
397

Unit IDs

4WFA|1|X|C|1260
4WFA|1|X|G|1261
4WFA|1|X|U|1262
4WFA|1|X|A|1263
4WFA|1|X|A|1264
4WFA|1|X|G|1265

Current chains

Chain X
23S rRNA

Nearby chains

Chain I
50S ribosomal protein L15
Chain N
50S ribosomal protein L20
Chain O
50S ribosomal protein L21

Coloring options:


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