HL_4WFA_057

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

AGUUCACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_057 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.0916

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WFA|1|X|A|2498
4WFA|1|X|G|2499
4WFA|1|X|U|2500
4WFA|1|X|U|2501
4WFA|1|X|C|2502
4WFA|1|X|A|2503
4WFA|1|X|C|2504
4WFA|1|X|A|2505
4WFA|1|X|U|2506

Current chains

Chain X

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36