HL_4WFA_062

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

UGCCAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFA_062 not in the Motif Atlas

Homologous match to HL_4WF9_061

Geometric discrepancy: 0.1111

The information below is about HL_4WF9_061

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_12125.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

4WFA|1|X|U|2728
4WFA|1|X|G|2729
4WFA|1|X|C|2730
4WFA|1|X|C|2731
4WFA|1|X|A|2732
4WFA|1|X|A|2733

Current chains

Chain X

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L17