HL_4WFB_053

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

GGUUGAAUC

Length

9 nucleotides

Bulged bases

4WFB|1|X|G|2334, 4WFB|1|X|A|2336

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFB_053 not in the Motif Atlas

Homologous match to HL_4WF9_051

Geometric discrepancy: 0.2066

The information below is about HL_4WF9_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|G|2330
4WFB|1|X|G|2331
4WFB|1|X|U|2332
4WFB|1|X|U|2333
4WFB|1|X|G|2334
4WFB|1|X|A|2336
4WFB|1|X|A|2338
4WFB|1|X|U|2339
4WFB|1|X|C|2340

Current chains

Chain X

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L5