HL_4WFB_057

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CGCAUGGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WFB_057 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.0875

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

4WFB|1|X|C|2431
4WFB|1|X|G|2432
4WFB|1|X|C|2433
4WFB|1|X|A|2434
4WFB|1|X|U|2435
4WFB|1|X|G|2436
4WFB|1|X|G|2437
4WFB|1|X|A|2438
4WFB|1|X|A|2439
4WFB|1|X|G|2440

Current chains

Chain X

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L15