HL_4WOI_023

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4WOI|1|AA|U|1030, 4WOI|1|AA|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WOI_023 not in the Motif Atlas

Homologous match to HL_6CZR_235

Geometric discrepancy: 0.5192

The information below is about HL_6CZR_235

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|AA|C|1028
4WOI|1|AA|U|1029
4WOI|1|AA|U|1030
4WOI|1|AA|C|1031
4WOI|1|AA|G|1032
4WOI|1|AA|G|1033

Current chains

Chain AA

16S ribosomal RNA

Nearby chains