HL_4WOI_187
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 4WOI|1|DA|U|421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WOI_187 not in the Motif Atlas
- Homologous match to HL_6CZR_082
- Geometric discrepancy: 0.3121
- The information below is about HL_6CZR_082
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50006.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 6
Unit IDs
4WOI|1|DA|C|419
4WOI|1|DA|U|420
4WOI|1|DA|U|421
4WOI|1|DA|C|422
4WOI|1|DA|G|423
4WOI|1|DA|G|424
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
- Chain AK
- 30S ribosomal protein S11
- Chain AU
- 30S ribosomal protein S21
- Chain DC
- 30S ribosomal protein S3
- Chain DD
- 30S ribosomal protein S4
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