HL_4WOI_202

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGUCCGGCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|DA|C|1132
4WOI|1|DA|G|1133
4WOI|1|DA|G|1134
4WOI|1|DA|U|1135
4WOI|1|DA|C|1136
4WOI|1|DA|C|1137
4WOI|1|DA|G|1138
4WOI|1|DA|G|1139
4WOI|1|DA|C|1140
4WOI|1|DA|C|1141
4WOI|1|DA|G|1142

Current chains

Chain DA

16S ribosomal RNA

Nearby chains

Chain DI

30S ribosomal protein S9