HL_4WPO_013

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

4WPO|1|AA|G|438

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_013 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.058

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

4WPO|1|AA|G|437
4WPO|1|AA|G|438
4WPO|1|AA|A|439
4WPO|1|AA|C|440
4WPO|1|AA|C|441
4WPO|1|AA|A|442
4WPO|1|AA|C|443
4WPO|1|AA|C|444

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A1

50S ribosomal protein L28

Chain AP

50S ribosomal protein L15