HL_4WPO_067

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

4WPO|1|AA|A|2830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_067 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0513

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WPO|1|AA|G|2829
4WPO|1|AA|A|2830
4WPO|1|AA|A|2831
4WPO|1|AA|G|2832
4WPO|1|AA|A|2833
4WPO|1|AA|C|2834
4WPO|1|AA|C|2835
4WPO|1|AA|A|2836
4WPO|1|AA|C|2837

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AR

50S ribosomal protein L17

Chain AT

50S ribosomal protein L19