HL_4WPO_088

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUCUC

Length

5 nucleotides

Bulged bases

4WPO|1|BA|U|839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_088 not in the Motif Atlas

Homologous match to HL_6CZR_089

Geometric discrepancy: 0.2936

The information below is about HL_6CZR_089

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.1

Basepair signature

cWW-F

Number of instances in this motif group

51

Unit IDs

4WPO|1|BA|G|838
4WPO|1|BA|U|839
4WPO|1|BA|C|840
4WPO|1|BA|U|841
4WPO|1|BA|C|848

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BB

30S ribosomal protein S2