HL_4WPO_110
3D structure
- PDB id
- 4WPO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 4WPO|1|BY|U|33, 4WPO|1|BY|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WPO_110 not in the Motif Atlas
- Homologous match to HL_5EL4_222
- Geometric discrepancy: 0.4794
- The information below is about HL_5EL4_222
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WPO|1|BY|G|30
4WPO|1|BY|A|31
4WPO|1|BY|PSU|32
4WPO|1|BY|U|33
4WPO|1|BY|G|34
4WPO|1|BY|A|35
4WPO|1|BY|A|36
4WPO|1|BY|MIA|37
4WPO|1|BY|A|38
4WPO|1|BY|PSU|39
4WPO|1|BY|C|40
Current chains
- Chain BY
- E-site tRNA
Nearby chains
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BG
- 30S ribosomal protein S7
- Chain BK
- 30S ribosomal protein S11
- Chain BV
- mRNA
- Chain BX
- Transfer RNA; tRNA
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