HL_4WPO_120

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCUUGUC

Length

7 nucleotides

Bulged bases

4WPO|1|CA|U|271|||K, 4WPO|1|CA|U|271|||N

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_120 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.2654

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4WPO|1|CA|G|271|||I
4WPO|1|CA|C|271|||J
4WPO|1|CA|U|271|||K
4WPO|1|CA|U|271|||L
4WPO|1|CA|G|271|||M
4WPO|1|CA|U|271|||N
4WPO|1|CA|C|271|||O

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L28