HL_4WPO_140

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_140 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.0676

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

4WPO|1|CA|G|978
4WPO|1|CA|G|979
4WPO|1|CA|A|980
4WPO|1|CA|A|981
4WPO|1|CA|C|982
4WPO|1|CA|A|983
4WPO|1|CA|A|984
4WPO|1|CA|C|985

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C3

50S ribosomal protein L30

Chain CU

50S ribosomal protein L20