HL_4WPO_195

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

4WPO|1|DA|C|470

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_195 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1113

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4WPO|1|DA|C|458
4WPO|1|DA|G|460
4WPO|1|DA|A|461
4WPO|1|DA|C|470
4WPO|1|DA|G|471
4WPO|1|DA|A|472
4WPO|1|DA|G|473

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DP

30S ribosomal protein S16