HL_4WPO_207

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_207 not in the Motif Atlas

Homologous match to HL_4LFB_024

Geometric discrepancy: 0.087

The information below is about HL_4LFB_024

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

4WPO|1|DA|C|1076
4WPO|1|DA|G|1077
4WPO|1|DA|U|1078
4WPO|1|DA|G|1079
4WPO|1|DA|A|1080
4WPO|1|DA|G|1081

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DB

30S ribosomal protein S2

Chain DE

30S ribosomal protein S5