Loop HL_4WPO

3D structure

PDB id: 4WPO (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å

Loop

Sequence: GGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAAUAGCUCAC
Length: 50 nucleotides
Bulged bases: 4WPO|1|CA|U|1061, 4WPO|1|CA|A|1070
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WPO|1|CA|G|1055
4WPO|1|CA|G|1056
4WPO|1|CA|A|1057
4WPO|1|CA|G|1058
4WPO|1|CA|G|1059
4WPO|1|CA|U|1060
4WPO|1|CA|U|1061
4WPO|1|CA|G|1062
4WPO|1|CA|G|1063
4WPO|1|CA|C|1064
4WPO|1|CA|U|1065
4WPO|1|CA|U|1066
4WPO|1|CA|A|1067
4WPO|1|CA|G|1068
4WPO|1|CA|A|1069
4WPO|1|CA|A|1070
4WPO|1|CA|G|1071
4WPO|1|CA|C|1072
4WPO|1|CA|A|1073
4WPO|1|CA|G|1074
4WPO|1|CA|C|1075
4WPO|1|CA|C|1076
4WPO|1|CA|A|1077
4WPO|1|CA|U|1078
4WPO|1|CA|C|1079
4WPO|1|CA|C|1080
4WPO|1|CA|U|1081
4WPO|1|CA|U|1082
4WPO|1|CA|U|1083
4WPO|1|CA|A|1084
4WPO|1|CA|A|1085
4WPO|1|CA|A|1086
4WPO|1|CA|G|1087
4WPO|1|CA|A|1088
4WPO|1|CA|G|1089
4WPO|1|CA|U|1090
4WPO|1|CA|G|1091
4WPO|1|CA|C|1092
4WPO|1|CA|G|1093
4WPO|1|CA|U|1094
4WPO|1|CA|A|1095
4WPO|1|CA|A|1096
4WPO|1|CA|U|1097
4WPO|1|CA|A|1098
4WPO|1|CA|G|1099
4WPO|1|CA|C|1100
4WPO|1|CA|U|1101
4WPO|1|CA|C|1102
4WPO|1|CA|A|1103
4WPO|1|CA|C|1104

Current chains

Chain CA: 23S Ribosomal RNA

Nearby chains

Chain C9: 50S ribosomal protein L36
Chain CH: 50S ribosomal protein L6
Chain CK: 50S ribosomal protein L10
Chain CL: 50S ribosomal protein L11
Chain CQ: 50S ribosomal protein L16
Chain CZ: 50S ribosomal protein L25
Chain DZ: 50S ribosomal protein L9,Elongation factor G

HL_4WPO_232