HL_4WQ1_109

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

4WQ1|1|1G|U|208

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQ1_109 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2786

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

4WQ1|1|1G|C|201
4WQ1|1|1G|U|208
4WQ1|1|1G|U|209
4WQ1|1|1G|U|210
4WQ1|1|1G|G|216

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains