HL_4WQ1_215
3D structure
- PDB id
- 4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GACU(QUO)UA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: QUO, MIA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQ1_215 not in the Motif Atlas
- Homologous match to HL_5E81_206
- Geometric discrepancy: 0.2065
- The information below is about HL_5E81_206
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WQ1|1|1L|G|31
4WQ1|1|1L|A|32
4WQ1|1|1L|C|33
4WQ1|1|1L|U|34
4WQ1|1|1L|QUO|35
4WQ1|1|1L|U|36
4WQ1|1|1L|A|37
4WQ1|1|1L|MIA|38
4WQ1|1|1L|A|39
4WQ1|1|1L|PSU|40
4WQ1|1|1L|C|41
Current chains
- Chain 1L
- tRNA-Tyr
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 3A
- 30S ribosomal protein S12
- Chain 4L
- mRNA
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