HL_4WQ1_241
3D structure
- PDB id
- 4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCGAAAGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQ1_241 not in the Motif Atlas
- Geometric match to HL_8KAL_008
- Geometric discrepancy: 0.2753
- The information below is about HL_8KAL_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
4WQ1|1|1G|C|1163
4WQ1|1|1G|G|1164
4WQ1|1|1G|C|1165
4WQ1|1|1G|G|1166
4WQ1|1|1G|A|1167
4WQ1|1|1G|A|1169
4WQ1|1|1G|A|1170
4WQ1|1|1G|G|1171
4WQ1|1|1G|C|1172
4WQ1|1|1G|G|1173
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 12
- 30S ribosomal protein S2
- Chain 1I
- 30S ribosomal protein S10
- Chain 62
- 30S ribosomal protein S7
Coloring options: