HL_4WQF_059

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_059 not in the Motif Atlas

Homologous match to HL_7RQB_060

Geometric discrepancy: 0.0868

The information below is about HL_7RQB_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4WQF|1|AA|C|2483
4WQF|1|AA|G|2484
4WQF|1|AA|U|2485
4WQF|1|AA|C|2486
4WQF|1|AA|C|2487
4WQF|1|AA|A|2488
4WQF|1|AA|C|2489
4WQF|1|AA|A|2490
4WQF|1|AA|G|2491

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A9

50S ribosomal protein L36

Chain AH

50S ribosomal protein L6

Chain BZ

50S ribosomal protein L9,Elongation factor G