HL_4WQF_135

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

4WQF|1|CA|C|888

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_135 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.3442

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

4WQF|1|CA|C|884
4WQF|1|CA|C|885
4WQF|1|CA|C|886
4WQF|1|CA|A|887
4WQF|1|CA|C|888
4WQF|1|CA|C|889
4WQF|1|CA|A|890
4WQF|1|CA|G|892

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain DM

30S ribosomal protein S13