HL_4WQF_145

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4WQF|1|CA|U|1396, 4WQF|1|CA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_145 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.0639

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4WQF|1|CA|G|1389
4WQF|1|CA|U|1390
4WQF|1|CA|U|1391
4WQF|1|CA|A|1392
4WQF|1|CA|A|1393
4WQF|1|CA|U|1394
4WQF|1|CA|A|1395
4WQF|1|CA|U|1396
4WQF|1|CA|U|1397
4WQF|1|CA|C|1398

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CX

50S ribosomal protein L23